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Initialize database structure

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Pierre HUBERT 2023-05-24 13:52:24 +02:00
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commit df64d51445
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34
README.md
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# GeneIT # GeneIT
WIP project WIP project
## Setup dev env
1. Install prerequisites:
1. docker
2. docker-compose
3. rust
2. Start services:
```bash
cd geneit_backend
docker-compose up
```
3. Install Diesel CLI:
```bash
sudo apt install libpq5 libpq-dev
cargo install diesel_cli --no-default-features --features postgres
```
4. Initialize database:
```bash
diesel migation run
```
> Note: You can access the database directly using this command:
>
> ```bash
> PGPASSWORD=pass psql -h localhost -p 5432 -U user -d bioclimsol
> ```

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geneit_backend/.env Normal file
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DATABASE_URL=postgres://user:pass@localhost/geneit

1
geneit_backend/.gitignore vendored
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target/ target/
storage/ storage/
.idea

414
geneit_backend/Cargo.lock generated Normal file
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# This file is automatically @generated by Cargo.
# It is not intended for manual editing.
version = 3
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2
geneit_backend/Cargo.toml
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@ -6,3 +6,5 @@ edition = "2021"
# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html # See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
[dependencies] [dependencies]
clap = { version = "4.3.0", features = ["derive", "env"] }
diesel = { version = "2.0.4", features = ["postgres"] }

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geneit_backend/diesel.toml Normal file
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# For documentation on how to configure this file,
# see https://diesel.rs/guides/configuring-diesel-cli
[print_schema]
file = "src/schema.rs"
[migrations_directory]
dir = "migrations"

0
geneit_backend/migrations/.keep Normal file
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6
geneit_backend/migrations/00000000000000_diesel_initial_setup/down.sql Normal file
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-- This file was automatically created by Diesel to setup helper functions
-- and other internal bookkeeping. This file is safe to edit, any future
-- changes will be added to existing projects as new migrations.
DROP FUNCTION IF EXISTS diesel_manage_updated_at(_tbl regclass);
DROP FUNCTION IF EXISTS diesel_set_updated_at();

36
geneit_backend/migrations/00000000000000_diesel_initial_setup/up.sql Normal file
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-- This file was automatically created by Diesel to setup helper functions
-- and other internal bookkeeping. This file is safe to edit, any future
-- changes will be added to existing projects as new migrations.
-- Sets up a trigger for the given table to automatically set a column called
-- `updated_at` whenever the row is modified (unless `updated_at` was included
-- in the modified columns)
--
-- # Example
--
-- ```sql
-- CREATE TABLE users (id SERIAL PRIMARY KEY, updated_at TIMESTAMP NOT NULL DEFAULT NOW());
--
-- SELECT diesel_manage_updated_at('users');
-- ```
CREATE OR REPLACE FUNCTION diesel_manage_updated_at(_tbl regclass) RETURNS VOID AS $$
BEGIN
EXECUTE format('CREATE TRIGGER set_updated_at BEFORE UPDATE ON %s
FOR EACH ROW EXECUTE PROCEDURE diesel_set_updated_at()', _tbl);
END;
$$ LANGUAGE plpgsql;
CREATE OR REPLACE FUNCTION diesel_set_updated_at() RETURNS trigger AS $$
BEGIN
IF (
NEW IS DISTINCT FROM OLD AND
NEW.updated_at IS NOT DISTINCT FROM OLD.updated_at
) THEN
NEW.updated_at := current_timestamp;
END IF;
RETURN NEW;
END;
$$ LANGUAGE plpgsql;

2
geneit_backend/migrations/2023-05-24-102711_create_users/down.sql Normal file
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@ -0,0 +1,2 @@
-- This file should undo anything in `up.sql`
DROP table users;

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geneit_backend/migrations/2023-05-24-102711_create_users/up.sql Normal file
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@ -0,0 +1,12 @@
-- Create table
CREATE TABLE users (
id SERIAL PRIMARY KEY,
email VARCHAR(255) NOT NULL,
password VARCHAR NULL,
reset_password_token VARCHAR(150) NULL,
time_create BIGINT NOT NULL,
time_gen_reset_token BIGINT NOT NULL DEFAULT 0,
time_activate BIGINT NOT NULL DEFAULT 0,
active BOOLEAN NOT NULL DEFAULT TRUE,
admin BOOLEAN NOT NULL DEFAULT FALSE
)

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geneit_backend/src/schema.rs Normal file
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@ -0,0 +1,15 @@
// @generated automatically by Diesel CLI.
diesel::table! {
users (id) {
id -> Int4,
email -> Varchar,
password -> Nullable<Varchar>,
reset_password_token -> Nullable<Varchar>,
time_create -> Int8,
time_gen_reset_token -> Int8,
time_activate -> Int8,
active -> Bool,
admin -> Bool,
}
}